Applied Biosystems™ InnoviGene™ Suite, sequencing

Description

• Applied Biosystems InnoviGene Suite software enables you to analyze and manage capillary electrophoresis sequencing data generated by Applied Biosystems genetic analyzers
• The software provides a streamlined workflow to guide you through uploading and analyzing the data and generating reports
• InnoviGene Suite includes SAE administrator console software with security, audit, and electronic signature (SAE) functions that support compliance with guidelines on electronic records security and helps prevent unauthorized access to the instrument
• The software is delivered via a download link sent to you after purchase
• Applications within InnoviGene Suite software InnoviGene Suite software allows you to create projects for use with other applications that are integrated into the software
• These applications (Sequence Quality Check and Sequence Identity) enable you to complete an end-to-end workflow using projects that contain related files
• Sequence Quality Check application —enables you to perform the following activities: View the quality information for trace files Change quality settings and reanalyze trace files Perform comparative analysis across multiple trace files Sequence Identity application —enables you to view the assembly of multiple files compared to a reference and view basecall mismatches
• Specifically, you can perform the following activities with the application: Basecalling, quality value assignment, and mixed base identification Trimming low-quality ends from each sequence, if the setting is active Identifying poor-quality samples Assembling the samples against the reference sequence and generating a specimen consensus sequence Reviewing the basecalling quality values and consensus quality values Identifying mismatches by aligning and comparing specimen sequences to the reference sequence
• A mismatch is a position in the specimen that does not match with the reference sequence
• Mismatches include base changes, insertions, and deletions
• Assigning specimen status based on alignment with the reference sequence and coverage criteria Editing basecalls in samples or the consensus Generating reports and results for export in CSV format